Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930634.1_cds_XP_016477662.1_69365
CDS Infomation

[gene=LOC107799105] [db_xref=GeneID:107799105] [protein=pentatricopeptide repeat-containing protein At1g09220, mitochondrial] [protein_id=XP_016477662.1] [location=31440..32837] [gbkey=CDS]
Sequence

ATGGGCAGAGATGTTAATCATCTTCTTAACCTCGTTAAAAGACACCAGAACTACCGCAGA
GCAATTCAACAGATTCATACTCAGTTAATATTCACGACTGCCGAAAACGCCTTTAACCCA
AGTTCAATACCCATCATATTAACTTTGTGGAACTCTGTAATTCGCCATTACTCTCTTGGC
ATTTTACCACAAGAAGCCTTTTTTCTTTTCCAGAAACTCCGATTCCAGTATCAAAAAGTT
ATCTTTTTTGATAGTTTTACATATTTATTCTTGATCAAAGCATCTGCCAATTTAGAACAG
TTTTATATTGGAAAACAGCTTCATTGTTTGAGCTTGAAGGATGGATTTGAATCGCATGTT
TATGTGCAAACTGCCTTGGTTAATATGTATGGTGAATGTGGGTTAGTTAGGGAAGCGAAG
AAGGTGTTCGATAAAATGCCTGTCAGAAATTCTGTGACTTGGAATGCTTTGATCAGTGGT
TTTGTTAAATGGGGTGATGTTAAGGTTGCTCGGGCGGTGTTCGATGCAATGCCGGAGAAG
AATGTCATTTCGTGGACGGGTCTCATTGATGGGTATACGCGGATGGGTCGGTTTAATGAG
GCTTTGACTTTGTTTCGCGAGATGGTTGTGGTCGAGGGGATTAAACCGAGTGAAGTGAGT
CTTTTGGCGATTTTCCCTGCTATTTGGAATGTTAGGTGTCTAGAGTGTTGCCAAATGGTT
CACGCTTACGGGGAGAAAAGTGGTATTAATGCTTTTGATATCCGTGTTATGAATTCGCTT
GTAGATGCTTATGCTAAATGTGGAAGCATAGACGATGCTGTGAGAGTTTTTGAGGATATA
ATAGATGAAAGAAGGAATTTGGTGTCATGGACGTCGATAATATCAGGATGTGCAATGCAT
GGGATGGCAAAAGAAGCTTCGGATAGTTATCAGATGATGGTGGATGCAGGTGTTGAACCG
AATCGCATAACGTTTTTGAGCATGCTCAATGCTTGCAGTCATGGAGGTTTAGTGGATGAG
GGGCTCGAGTTTTTCAGGAAGATGGTTGATGAGTTTGGGATTCAACCAGACATTAAGCAT
TATGGCAGCTTGATAGACATGTTAGGCAGAGAAGGTAGGTTAGTAGAAGCAGAAGAAATA
GCTTTGGAGATACCTAATGCTATGTCTAATGTTGTGATTTGGAGAACACTATTGGGAGCT
TGTAGTTTTCATGATAATGCAGATCTGGGAGAAAGAGTTATGCAGAAGATCATGGAGATG
GAAAACAAATACGGTGGTGATTATGTGCTTCTTTCGAATATCCTTGCAGGTATGGGCAGG
TATGTTGATTCTGAGGTTGTGAGGCGAGTGATGGATGAGCAAAATGCACTCAAAGCTCCC
GGCCTTAGCTTTACTTAA

Peptide Sequence

PEP ID

XP_016477662.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Nicotiana tabacum]
Sequence

MGRDVNHLLNLVKRHQNYRRAIQQIHTQLIFTTAENAFNPSSIPIILTLWNSVIRHYSLG
ILPQEAFFLFQKLRFQYQKVIFFDSFTYLFLIKASANLEQFYIGKQLHCLSLKDGFESHV
YVQTALVNMYGECGLVREAKKVFDKMPVRNSVTWNALISGFVKWGDVKVARAVFDAMPEK
NVISWTGLIDGYTRMGRFNEALTLFREMVVVEGIKPSEVSLLAIFPAIWNVRCLECCQMV
HAYGEKSGINAFDIRVMNSLVDAYAKCGSIDDAVRVFEDIIDERRNLVSWTSIISGCAMH
GMAKEASDSYQMMVDAGVEPNRITFLSMLNACSHGGLVDEGLEFFRKMVDEFGIQPDIKH
YGSLIDMLGREGRLVEAEEIALEIPNAMSNVVIWRTLLGACSFHDNADLGERVMQKIMEM
ENKYGGDYVLLSNILAGMGRYVDSEVVRRVMDEQNALKAPGLSFT

Transcript Sequence

Gene sequence data has not been registered.